King, J. M., Brutinel, E. D., Marsden, A. E., Schubot, F. D., Yahr, T. L.* (2012) Orientation of Pseudomonas aeruginosa ExaA monomers bound to promoter DNA and base-specific contacts with the PexoT promoter, Journal of Bacteriology 194: 2573-85.

Jing, X., Robinson, H. R., Heffron, J. D., Popham, D. L., Schubot, F. D. (2012) The catalytic domain of the germination-specific lytic transglycosylase SleB from Bacillus anthracis displays a unique active site topology. Proteins: Struture, Function, and Bioinformatics 80: 2469-75.

Black, W. P., Schubot, F. D., Li, Z., and Yang, Z. (2010) Phosphorylation and dephosphorylation among Dif chemosensory proteins essential for exopolysaccharide regulation in Myxococcus xanthus, J Bacteriol, 192: 4267-4274.

Vogelaar, N. J., Jing, X., Robinson, H. H., and Schubot, F. D. (2010) Analysis of the crystal structure of the ExsC.ExsE complex reveals distinctive binding interactions of the Pseudomonas aeruginosa type III secretion chaperone ExsC with ExsE and ExsD, Biochemistry, 49: 5870-5879.

Jing, X., Jaw, J., Robinson, H., Schubot, F.D. (2010) Crystal structure and oligomeric state of the RetS signaling kinase sensory domain. Proteins: Structure, Function, and Bioinformatics, 78(7):1631-40.

Bernhards, R.C., Jing, X., Vogelaar, N.V., Robinson, H., Schubot, F.D. (2009) Structural evidence suggests that antiactivator ExsD from Pseudomonas aeruginosa is a DNA binding protein. Protein Science, 18(3): 503-13.

Cacciapuoti, G., Porcelli, M., Moretti, M. A., Sorrentino, F., Concilio, L., Zappia, V., Liu, Z. J., Tempel, W., Schubot, F.D., Rose, J. P., Wang, B. C., Brereton, P. S., Jenney, F. E., and Adams, M. W. (2007) The first agmatine/cadaverine aminopropyl transferase: biochemical and structural characterization of an enzyme involved in polyamine biosynthesis in the hyperthermophilic archaeon Pyrococcus furiosus. Journal of Bacteriology 189: 6057-67.

Sun, P., Austin, B., Schubot, F.D., Waugh D.S. (2007) New protein fold revealed by a 1.65 A resolution crystal structure of Francisella tularensis pathogenicity island protein IglC. Protein Science 16, 2560-65.

Schubot, F. D., Tropea, J. E., Waugh, D. S. (2006) Crystal structure of the BTB/POZ domain of human transcriptional repressor LRF, a master regulator of oncogenesis. Biochem. Biophys. Res. Commun., 351(1):1-6.

Ferracci, F., Schubot, F. D., Waugh, D. S., and Plano, G. V. (2005) Selection and Characterization of Yersinia pestis YopN Mutants that Constitutively Block Yop Secretion. Molecular Microbiology, 57(4): 970-87.

Schubot, F. D., Cherry, S., Austin, B. P., Tropea, J. E., and Waugh, D. S. (2005) Crystal structure of the protease-resistant core domain of Yersinia pestis virulence factor YopR. Protein Science, 14: 1679-1683.

Schubot, F. D., Jackson, M. W., Penrose, K. J., Cherry, S., Tropea, J. E., Plano, G. V., and Waugh, D. S. (2005) Three-dimensional structure of a macromolecular assembly that regulates type III secretion in Yersinia pestis. J. Mol. Biol., 346(4): 1147-61.

Kataeva, I. A., Uversky, V. N., Brewer, J. M., Schubot, F. D., Rose, J. P., Wang, B.-C., and Ljungdahl, L. G. (2004) Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA Protein Engineering, 17: 759-69.

Shah, A. K., Liu, Z.-J., Stewart, P. D., Schubot, F. D., Rose, J. P., Newton, M. G. and Wang, B.-C. (2005) On increasing protein-crystallization throughput for X-ray diffraction studies. Acta Cryst. D61: 123-129.

Schubot, F. D. and Waugh D. S. (2004) A pivotal role for reductive methylation in the de novo crystallization of a ternary complex composed of Yersinia pestis virulence factors YopN, SycN and YscB. Acta Cryst. D60: 1981-86.

Tempel, W., Liu, Z. J., Schubot, F. D., Shah, A., Weinberg, M. V., Jenney, F. E., Jr., Arendall, W. B., 3rd, Adams, M. W., Richardson, J. S., Richardson, D. C., Rose, J. P., and Wang, B. C. (2004) Structural genomics of Pyrococcus furiosus: X-ray crystallography reveals 3D domain swapping in rubrerythrin. Proteins, 57: 878-882.

Schubot, F. D., Kataeva, I. A., Chang, J., Shah, A. K., Ljungdahl, L. G., Rose, J. P., and Wang, B. C. (2003) Structural Basis for exocellolytic properties of the catalytic domain of 1,4-beta-cellobiosidase Gh9 from C.thermocellum. Biochemistry 43(5): 1163-70.

Schubot, F. D., Kataeva, I. A., Blum, D. L., Shah, A. K., Ljungdahl, L. G., Rose, J. P., and Wang, B. C. (2001) Structural Basis for the Substrate Specificity of the Feruloyl Esterase Domain of the Cellulosomal Xylanase Z from Clostridium thermocellum. Biochemistry 40: 12524-12532.

Schubot, F.D., Chen, C. J., Rose, J. P., Dailey, T. A., Dailey, H. A., and Wang, B. C. (2001) The Crystal Structure of the Transcription Factor sc-mtTFB Offers Insights into Mitochondrial Transcription. Protein Science 10: 1980-1988.

Schubot, F. D., Chen, C. J., Rose, J. P., and Wang, B. C. (2000) Crystallization and preliminary X-ray diffraction analysis of the mitochondrial transcription factor sc-mtTFB from Saccharomyces cerevisiae. Acta Cryst. D56: 902-903.

Blum, D. L., Schubot, F. D., Ljungdahl, L. G., Rose, J. P., and Wang, B. C. (2000) Crystallization and preliminary X-ray analysis of the Clostridium thermocellum cellulosome xylanase Z feruloyl esterase domain. Acta Cryst. D56: 1027-1029.

Schubot, F. D., Hossain, M. B., van der Helm, D., Pais, M., and Debitus, C. (1998) Crystal structure and absolute configuration of the indole alkaloid arborescidine C. J.Chem.Crystallogr., 28: 123-26.

Garrison, G. L., Berlin, K. D., Scherlag, B. J., Lazzara, R., Patterson, E., Fazekas, T., Sangiah, S., Chen, C. L., Schubot, F. D., and van der Helm, D. (1996) Novel 3,7- diheterabicyclo[3.3.1]nonanes that possess predominant class III antiarrhythmic activity in 1-4 day post infarction dog models: X-ray diffraction analysis of 3-[4-(1H- imidazol-1-yl)benzoyl]-7-isopropyl-3,7-diazabicyclo[3.3.1]nonane dihydroperchlorate. J.Med.Chem. 39: 132559-70.

Garrison, G. L., Berlin, K. D., Scherlag, B. J., Lazzarra, R., Patterson, E., Sangiah, S., Chen, C. L., Schubot, F. D., Siripitayananon, J., Hossain, M. B., and van der Helm, D. (1993) 7,3,7,9-Triheterabicyclo[3.3.2]decan-10-ones: An Unusual Family of Heterocycles Obtained from 3,7-Diheterabicyclo [3.3.1]nonan-9-ones. J. Org. Chem. 58: 7670-7678.